SubtiBank SubtiBank
ytlR [2018-06-21 15:06:30]
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ytlR [2018-06-21 15:06:30]

unknown
locus
BSU29940
pI
10.07
mw
35.45 kDa
protein length
309 aa Sequence Blast
gene length
927 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    3,063,833 → 3,064,762

    The protein

    Structure

  • [PDB|2QV7] (diacylglycerol kinase, 25% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|29A38D244A07ED0973D0846B652238524F4DBC67|ytlP]-[gene|DB1491F13F8B55A360413E815E47A2B51D24395C|ytlQ]-[gene|ED4C1EA16FF96DA20F12B972CD2458FA3B49DDA5|ytlR]-[gene|7D783DD180D950A4B030BF5EA78CCE930A466A07|amyX]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD]: sigma factor, [Pubmed|26577401], in [regulon|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD regulon]
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    Biological materials

    Mutant

  • MGNA-A433 (ytlR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/433 NBRP B. subtilis, Japan]
  • BKE29940 (Δ[gene|ED4C1EA16FF96DA20F12B972CD2458FA3B49DDA5|ytlR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTCTCACCTGCTTAT, downstream forward: _UP4_TAAACGTGTTTGGAGGAGAG
  • BKK29940 (Δ[gene|ED4C1EA16FF96DA20F12B972CD2458FA3B49DDA5|ytlR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTCTCACCTGCTTAT, downstream forward: _UP4_TAAACGTGTTTGGAGGAGAG

    • References

  • 26577401